Integrated Stratigraphy


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Documentation for package ‘StratigrapheR’ version 1.2.4

Help Pages

are.lim.distinct Create / Check / Manipulate lim objects
are.lim.nonadjacent Create / Check / Manipulate lim objects
are.lim.nonunique Create / Check / Manipulate lim objects
are.lim.ordered Create / Check / Manipulate lim objects
as.lim Create / Check / Manipulate lim objects
bed.example Data for examples
bedtext Writes the names of the beds in a litholog
blackSet Sets the plot environment to draw a long vertical data set
boundary.example Data for examples
casing Finds values in a vector directly above and below a number
centersvg Draws a pointsvg object around a given point
centresvg Draws a pointsvg object around a given point
changesvg Changes a pointsvg object
chron.example Data for examples
clipsvg Clips a standardised pointsvg object into a given frame
convert Converts x values having an index into n values defined by the same y index
convertAxis Converts the axis following a given formula
dipfix Fix Dip
divisor Greatest Common Rational Divisor
earinc Recalculates inclination in equal area projection
earnet Draws an equal area stereonet
earplanes Draws planes on an equal area stereonet
earpoints Draws points on an equal area stereonet
encase Encases two numbers between multiples of a given number
encircle Draws circles
enlarge Expands the TRUE values of a T/F vector to their nth neighbours
every_nth Suppresses every n th element of a vector
example.ammonite Data for examples
example.ammonite.svg Data for examples
example.belemnite Data for examples
example.breccia Data for examples
example.HB2000.svg Data for examples
example.lense Data for examples
example.liquefaction Data for examples
flip.lim Inverts the intervals
fmean Fischer mean
fmod Universal remainder function
folder Creates a new folder where wanted if it does not exist yet
formFunction Converts a formula into a function
fossil.example Data for examples
framesvg Draws a standardised pointsvg object into a given frame
greySet Sets the plot environment to draw a long vertical data set
homogenise Homogenise a list
homogenize Homogenise a list
ignore Ignores useless objects
in.lim Finds the intervals encompassing values
in.window Irregular windowing
incfix Fix Inclination
infobar Draws rectangles with text in them
irreg.example Data for examples
is.divisor Greatest Common Rational Divisor
is.lim Create / Check / Manipulate lim objects
leftlog Finds bed intervals in a "litholog()"-like data frame
litholog Creates a litholog
log.loop.tex Data for examples
memento Remembers and outputs the result of a slow function
merge_list Method for merging lists by name
mid.lim Provides mid-points intervals in an ordered vector
minorAxis Adds an axis with minor ticks to a plot
minorAxisTicks Compute Pretty Minor Axis Tick Scales
multigons Draws several polygons
multilines Draws several lines
neatPick Interactive user modification of the arguments of a repeated function
neatPicked Runs neatPick without user input
nlegend New legend element
noise_emd Data for examples
nset Find indexes for n identical elements
order.lim Create / Check / Manipulate lim objects
pdfDisplay Generates PDF and SVG figures
pkgfind Find a specific pattern in the code of functions in a package
placesvg Draws a pointsvg object
planepoints Describes planes by points
pointsvg Converts line, rect, polygon and polyline class SVG objects into data frames
proxy.example Data for examples
proxy.example.litho Data for examples
rebound Simplifies boundary indicators for lim objects
repitch Converts pitch into declination and inclination
reposition Core correction
restore Plane correction
rmatrix Rotation matrix
rotate Spherical rotation around fixed axes
seq_log Gives the repartition of values for a log 10 scale between a given interval
seq_mult Sequence ordered by multiple
shift Circular shift
simp.lim Joins and orders adjacent or overlapping lim objects of same ID
sinpoint Gives a table of equally sampled points following a sinusoidal function
strat.mean Extrapolate and intrapolate tie points
strat.repair Remove instantaneous deposits and add thickness in hiatuses
strat.var Compute the realtive thickness variations of sections
StratigrapheR StratigrapheR: integrated stratigraphy for R
StratigrapheR.examples Data for examples
tie.lim Discretises lim objects
tie.points.example Data for examples
transphere Convertion between declinaison/inclination/intensity and cartesian coordinates
weld Combines segments with "litholog()"-like data frame
weldlog Changes boundaries segments in basic lithologs
whiteSet Sets the plot environment to draw a long data set
ylink Draws connection lines to connect two points in y
zeq_example Data for examples
zijderveld Draws a Zijderveld plot