# Allelic Series Test

## Documentation for package ‘AllelicSeries’ version 0.1.1.5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

Aggregator | Aggregator
ASBT | Allelic Series Burden Test
ASBTSS | Allelic Series Burden Test from Summary Statistics
ASKAT | Allelic Series SKAT Test
ASKATSS | Allelic Series SKAT-O from Summary Statistics
BaselineSS | Baseline Counts Test from Sumstats
CalcRegParam | Calculate Regression Parameters
CalcSumstats | Calculate Summary Statistics
CheckInputs | Check Inputs
CheckInputsSS | Input Checks for Summary Statistics
COAST | COding-variant Allelic Series Test
COAST-class | Allelic Series Output Class
COASTSS | COding-variant Allelic Series Test from Summary Statistics
CollapseGeno | Collapse Variants
Comparator | Comparator Test
ContainsInt | Contains Intercept?
CorCpp | Correlation C++
Counts | Count Variants and Carriers
DfOrNULL-class | Data.frame or Null Class
DGP | Data Generating Process
FilterGenos | Filter Noncausal Variants
GenAnno | Generate Genotype Annotations
GenCovar | Generate Covariates
GenGeno | Generate Genotypes
GenGenoMat | Generate Genotype Matrix
GenomicControl | Genomic Control
GenPheno | Generate Phenotypes
isPD | Check if Positive Definite
OLS | Ordinary Least Squares
print.COAST | Print Method for COAST Object.
ResidVar | Calculate Residual Variance
Score | Calculate Score Statistic
show-method | Show Method for COAST Object
SumCountSS | Allelic Sum Test from Sumstats