# ELISA Data Analysis with Batch Correction

## Documentation for package ‘ELISAtools’ version 0.1.8

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

ELISAtools-package | ELISA data analysis with batch correction
annotate.plate | S3 method to annotate ELISA plate
avoidZero | Get rid of zeros in a numeric vector
combineData | Combine elisa_batch data
ELISAtools | ELISA data analysis with batch correction
elisa_batch | Constructor function to build an elisa_batch object
elisa_batch-class | S4 class definition of an elisa_batch object
elisa_plate | Constructor function to build an elisa_plate object
elisa_plate-class | S4 class definition of an elisa_plate object
elisa_run | Constructor function to build an elisa_run object
elisa_run-class | S4 class definition of an elisa_run object
f5pl | The five-parameter logistic function
inv.f5pl | The inverse of the 5-parameter logistic function
load.ODs | Function to load OD data
load.ODs-method | Function to load OD data
loadData | Read data according to the design file
loadDB | Read the saved elisa_batch data
plotAlignData | Plot all batch data together
plotBatchData | Plot ELISA data for one batch
predictAll | Predict the concentration of samples based on fitting
prepareInitsLM | Prepare initial values for fitting shifts
prepareRegInput | Prepare the input for regressoin
rangeOD | Get the OD ranges (min/max)
read.annotation | Read the annotation of single ELISA plate
read.annotations | Read the annotations of plates
read.plate | Read the single ELISA OD plate
read.plates | Read the ELISA OD files
reportHtml | Report ELISA data in HTML format.
runFit | Fit 5- or 4-parameter logistic function
saveDataText | Save elisa_batch analysis results
saveDB | Save the elisa_batch data