# Using 'ggplot2' Feature to Write Readable R Code for Circular Visualization

## Documentation for package ‘circlizePlus’ version 0.9.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

+-method | Addition rules in circlizePlus
addition-rules | Addition rules in circlizePlus
allele_frequency | Data set in circlizePlus
ccArrow | Draw an arrow
ccBarplot | Draw barplots
ccBoxplot | Draw boxplots
ccCell | Generate a cell container that belongs to a particular sector
ccCell-class | S4 class ccCell
ccCellGeom-class | S4 class ccCellGeom
ccCells | Generate a list of multiple object ccCell-class
ccCells-class | S4 class ccCells
ccDendrogram | Draw dendrogram plots in a track
ccGenomicAxis | Add genomic axes
ccGenomicCellGeom-class | S4 class ccGenomicCellGeom
ccGenomicDensity | Create a track of density plot
ccGenomicHeatmap | Define a heatmap track for genomic graph
ccGenomicIdeogram | Define an ideograms track for genomic graph
ccGenomicLabels | Add labels to specific genomic track
ccGenomicLines | Add lines for genomic data visualization
ccGenomicLink | Add links between two sets of genomic positions
ccGenomicLink-class | S4 class ccGenomicLink
ccGenomicPoints | Add points for genomic data visualization
ccGenomicRainfall | Create a rainfall plot
ccGenomicRect | Draw rectangle for genomic data visualization
ccGenomicText | Add text for genomic data visualization
ccGenomicTrack | Define a track for genomic data visualization
ccGenomicTrack-class | S4 class ccGenomicTrack
ccHeatmap | Object generator for S4 class ccHeatmap
ccHeatmap-class | S4 class ccHeatmap
ccHeatmapLink | Draw a link between two matrix rows in the circular heatmap
ccHeatmapLink-class | S4 class ccHeatmapLink
ccLines | Draw lines in a region
ccLink | Add a link
ccLink-class | S4 class ccLink
ccPar | Parameters for the circular layout
ccPar-class | Object generator for S4 class ccPar
ccPlot | Object generator for S4 class ccPlot
ccPlot-class | S4 class ccPlot
ccPoints | Draw points in a region
ccPolygon | Draw polygon
ccRaster | Add raster image
ccRect | Draw rectangle in a region
ccSegments | Draw segments connecting points in a region
ccText | Draw text in a cell
ccTrack | Define a generic track
ccTrack-class | S4 class ccTrack
ccTrackGeom-class | S4 class ccTrackGeom
ccTrackHist | Define a track of histograms
ccTrackLines | Add lines on all sections of a single track.
ccTrackPoints | Add points on all sections of a single track.
ccTrackText | Add texts on all sections of a single track.
ccViolin | Draw violin plots
ccXaxis | Draw x-axis
ccYaxis | Draw y-axis
copy_number | Data set in circlizePlus
data-set | Data set in circlizePlus
junctions | Data set in circlizePlus
r1 | Data set in circlizePlus
r2 | Data set in circlizePlus
show-method | Draw the figures described by ccHeatmap
show-method | Draw the figures described by ccPlot