citHeader("To cite the porridge package in publications please use:")

year <- sub(".*(2[[:digit:]]{3})-.*", "\\1", meta$Date, perl = TRUE)
vers <- paste("R package version", meta$Version)

bibentry(bibtype="Manual",
    title  = "porridge: Ridge-Type Estimation of a Potpourri of Models",
    author = c(person(given = c("W.", "N."), family = "van Wieringen"),
               person(given = c("M."), family = "Aflakparast")),
    year = year,
    note = vers,
    url = "https://CRAN.R-project.org/package=porridge",
    textVersion =
      paste("van Wieringen, W.N. (", year,
            ") porridge:  Ridge-Type Estimation of a Potpourri of Models. ",
            vers, ". https://CRAN.R-project.org/package=porridge", sep = "")
)

bibentry(bibtype="Article",
    title = "Reconstruction of molecular network evolution from cross-sectional omics data",
    author = c(person(given = c("M."), family = "Aflakparast"),
               person(given = c("M.", "C.", "M."), family = "de Gunst"),
               person(given = c("W.", "N."), family = "van Wieringen")),
    journal = "Biometrical Journal",
    volume = "60", 
    number = "3", 
    pages =  "547-563",
    year = 2018,
    textVersion =
      paste("Aflakparast, M., de Gunst, M.C.M., van Wieringen, W.N. (2018). ",
		"Reconstruction of molecular network evolution from cross-sectional omics data. ", 
        	"Biometrical Journal, 60(3), 547-643", sep = "")
)

bibentry(bibtype="Article",
    title = "The generalized ridge estimator of the inverse covariance matrix",
    author = c(person(given = c("W.", "N."), family = "van Wieringen")),
    journal = "Journal of Computational and Graphical Statistics",
    volume = "28", 
    number = "4", 
    pages =  "932-942",
    year = 2019,
    textVersion =
      paste("van Wieringen, W.N. (2019). ",
		"The generalized ridge estimator of the inverse covariance matrix. ", 
        	"Journal of Computational and Graphical Statistics, 28(4), 932-942.", sep = "")
)

bibentry(bibtype="Book",
    title = "Lecture notes on ridge regression",
    author = c(person(given = c("W.", "N."), family = "van Wieringen")),
    journal = "Arxiv preprint",
    volume  = "arXiv:1509.09169",
    year = 2021,
    textVersion =
      paste("van Wieringen, W.N. (2019). ",
		"Lecture notes on ridge regression. ", 
        	"arXiv preprint, arXiv:1509.09169.", sep = ""),
    publisher="Arxiv"
)


bibentry(bibtype="Article",
    title = "Sequential learning of regression models by penalized estimation",
    author = c(person(given = c("W.", "N."), family = "van Wieringen"),
               person(given = c("H."),        family="Binder")),
    journal = "Journal of Computational and Graphical Statistics",
    volume = "", 
    number = "", 
    pages =  "",
    year = 2022,
    textVersion =
      paste("van Wieringen, W.N., Binder, H. (2022). ",
		"Sequential learning of regression models by penalized estimation. ", 
        	"Journal of Computational and Graphical Statistics, accepted.", sep = "")
)

bibentry(bibtype="Article",
    title = "Penalized estimation of the Gaussian graphical model from data with replicates",
    author = c(person(given = c("W.", "N."), family = "van Wieringen"),
               person(given=c("Y."),          family="Chen")),
    journal = "Statistics in Medicine",
    volume = "40", 
    number = "19", 
    pages =  "4279-4293",
    year = 2021,
    textVersion =
      paste("van Wieringen, W.N., Chen, Y. (2021). ",
		"Penalized estimation of the Gaussian graphical model from data with replicates. ", 
        	"Statistics in Medicine, 40(19), 4279-4293", sep = "")

)

bibentry(bibtype="Article",
    title = "Updating of the Gaussian graphical model through targeted penalized estimation",
    author = c(person(given = c("W.", "N."), family = "van Wieringen"),
                   person(given = c("K,", "A,"), family="Stam"), 
                   person(given = c("C.", "F.", "W."), family="Peeters"),
                   person(given = c("M.", "A."), family="van de Wiel")),
    journal = "Journal of Multivariate Analysis",
    volume = "178", 
    number = "article 104621", 
    year = 2020,
    textVersion =
      paste("van Wieringen, W.N., Stam, K.A., Peeters, C.F.W., van de Wiel, M.A. (2020). ",
		"Updating of the Gaussian graphical model through targeted penalized estimation.", 
        	"Journal of Multivariate Analysis, 178, article 104621", sep = "")

)


