Tidy, 'ggplot2'-Native Visualization for Genomic Variants


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Documentation for package ‘ggvariant’ version 0.1.0

Help Pages

ggvariant-package ggvariant: Tidy, ggplot2-Native Visualization for Genomic Variants
coerce_variants Coerce a plain data frame to a 'gvf' object
ggvariant ggvariant: Tidy, ggplot2-Native Visualization for Genomic Variants
gv_palette ggvariant colour palettes
plot_consequence_summary Consequence summary bar chart
plot_lollipop Lollipop plot of variants along a gene
plot_variant_spectrum Mutational spectrum (SBS) bar chart
read_vcf Read a VCF file into a tidy variant data frame
theme_ggvariant ggvariant ggplot2 theme