Package: strollur
Type: Package
Title: Store and Transfer Amplicon Sequence Data
Version: 0.1.2
Date: 2026-06-09
Authors@R: c(
    person("Sarah", "Westcott", role = c("aut"),
        email = "swestcot@umich.edu",
        comment = c(ORCID = "0009-0001-1529-8247")),
    person("Gregory", "Johnson", , "grejoh@umich.edu", role = c("aut"),
        comment = c(ORCID = "0009-0008-3890-0297")),
    person("Pat", "Schloss", , "pschloss@umich.edu",
        role = c("cph", "cre"), comment = c(ORCID = "0000-0002-6935-4275")))
Maintainer: Pat Schloss <pschloss@umich.edu>
Description: Stores the data associated with your amplicon sequence analysis. This includes nucleotide sequences, abundance, sample and treatment assignments, taxonomic classifications, asv, otu and phylotype clusters, metadata, trees and various reports. It is designed to facilitate data analysis across multiple R packages with utility functions to read / write from 'mothur', 'qiime2', 'dada2', and 'phyloseq'.
URL: https://github.com/mothur/strollur, https://mothur.org/strollur/
BugReports: https://github.com/mothur/strollur/issues
License: GPL (>= 3)
biocViews:
Imports: Rcpp, cli, methods, microseq, R.utils, R6, waldo, readr, ape,
        dplyr, tidyr, yaml, rbiom (>= 3.1.0), stats, utils
LinkingTo: Rcpp, cli, Rcereal
Depends: R (>= 4.5.0)
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), xml2, phyloseq,
        ggplot2, phylotypr, rhdf5, h5lite, pak
Config/testthat/edition: 3
Encoding: UTF-8
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0
RoxygenNote: 8.0.0
NeedsCompilation: yes
Packaged: 2026-06-19 14:36:46 UTC; swestcot
Author: Sarah Westcott [aut] (ORCID: <https://orcid.org/0009-0001-1529-8247>),
  Gregory Johnson [aut] (ORCID: <https://orcid.org/0009-0008-3890-0297>),
  Pat Schloss [cph, cre] (ORCID: <https://orcid.org/0000-0002-6935-4275>)
Repository: CRAN
Date/Publication: 2026-06-24 09:00:02 UTC
Built: R 4.7.0; x86_64-w64-mingw32; 2026-06-26 04:17:42 UTC; windows
Archs: x64
