Package: enviPathR
Title: Client for the 'enviPath' 'RESTful' API
Version: 1.0.0
Authors@R: 
    c(person(given = "Giulio", family = "Benedetti",
          role = c("aut", "cre", "cph"),
          email = "giulio.benedetti@utu.fi",
          comment = c(ORCID = "0000-0002-8732-7692")))
Description: 
    The environmental pathway database ('enviPath') is a key resource for the
    functional annotation and pathway prediction of microbial communities,
    providing knowledge on biotransformation pathways along with the chemical
    reactions and produced compounds. This package enables the programmatic
    access to 'enviPath' by porting the database 'RESTful' API from R. This
    includes methods to both retrieve entries and predict pathways for custom
    compounds.
biocViews: Software, DataImport, Cheminformatics, Annotation, Pathways,
        FunctionalPrediction
Depends: R (>= 4.1.0)
Imports: BiocParallel, httr2, stats, stringr, tools
Suggests: BiocStyle, ggraph, httptest2, igraph, knitr, rmarkdown,
        testthat (>= 3.0.0)
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 8.0.0
URL: https://envipath.github.io/enviPathR/
BugReports: https://github.com/enviPath/enviPathR/issues
Config/testthat/edition: 3
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2026-10-02 00:57:41 UTC; giulio
Author: Giulio Benedetti [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0002-8732-7692>)
Maintainer: Giulio Benedetti <giulio.benedetti@utu.fi>
Repository: CRAN
Date/Publication: 2026-10-14 15:32:06 UTC
