729d65ac9496ed6c05cde11a62a5d34b *DESCRIPTION
220766f3030828297db042c0016d3b42 *LICENSE
74adfc8148a652e3ef86fe40a7190e00 *NAMESPACE
e2e9351a137d738a8a8bf9f406d7dcd6 *NEWS.md
df6cc46bc7fae1a55b713f3d5065b35a *R/DiveR-package.R
48420446fb0dbe9b6dceda85e3eb8814 *R/concat_conserved_kmer.R
abe274733d079b0549d261033bdd0ea7 *R/json2csv.R
6dc1a2722e22457a7179349a9b341e1b *R/metadata_extraction.R
54323b4df6d21b9e08efbabbc24dae3e *R/plot_conservation_level.R
111d642412ffc5cd95e96031b0720b1c *R/plot_correlation.R
d508ad3f84a3deeb5f07c2cb14c1ade0 *R/plot_dynamics_protein.R
f778a5eef07ab68a2e28f1a4e2a040eb *R/plot_dynamics_proteome.R
c434f8e982c4ded161e94ecf2aab855a *R/plot_entropy.R
d425903d9a7a63b7ba9704341ae24c62 *R/plot_time.R
ee16f2de7468b8285420ff22f1212dbc *R/plot_world_map.R
2ea0a976a45614ec5f89c1eb68c88ae3 *R/sample_data.R
f1249feff12050f4e7f11860f1c0e581 *README.md
62b66209c063aa851aedb5ad64fbc7d4 *data/JSON_sample.rda
bd8962ecc600c91148820600ed78bfb5 *data/metadata.rda
7ab66b3fd68653c57318bfa2a6a0aedc *data/protein_2hosts.rda
a85ebef45d53feaa71932f4126c88937 *data/proteins_1host.rda
858919b5e025fa8ea2e2162908331ce1 *inst/extdata/GISAID_EpiCoV.faa
459bbd3a7e16dd489d12be091f4dbeb5 *inst/extdata/NCBI_Protein.faa
63ccf83861163d24f8470566a3712838 *man/JSON_sample.Rd
787711a850234d29bbfa2ec74981a901 *man/concat_conserved_kmer.Rd
f6ec5b69a40e2da7ccd68be7d7f3ca48 *man/extract_from_GISAID.Rd
722687d5ce68659c39253f0d1d8cb709 *man/extract_from_NCBI.Rd
bc8f755b926f2543f400dd8bfa502ca4 *man/figures/vdiver_overview_chart.png
e5307aee656c14596f3fc4cbbe31bf37 *man/json2csv.Rd
d4b48c5e27d7675488bb9cdca70acfec *man/match_region_to_target.Rd
5b544e0faaa749520993ac472e470601 *man/metadata.Rd
a0e997094c78b3676448e52999a8200a *man/metadata_extraction.Rd
7bdf952d639ba3090cacf479eeb998d1 *man/plot_conservation_level.Rd
b1bf1a9e7629f5e3c1358a2b25477726 *man/plot_correlation.Rd
a5557ac960931ebb7b6e14b001d97fda *man/plot_dynamics_protein.Rd
9cb05fdb41accd97faa8ca06afb8540f *man/plot_dynamics_proteome.Rd
075f3c4abed3f3543fac8c108ee0e1fb *man/plot_entropy.Rd
7d8507bb446a42c8c715f503163263bb *man/plot_time.Rd
c04a3101a5d32da983a20dded0446803 *man/plot_world_map.Rd
23cfe0679ed5c2193ab44e09da0f2845 *man/protein_2hosts.Rd
96bedfa676b80aefe1b4eba9fab9febb *man/proteins_1host.Rd
0f59f3a768a13481df70603f96b6673c *man/vDiveR-package.Rd
17a5572da216dce0138d6704916eb0ea *tests/testthat.R
7536fbf61062b0cf039004e7406a917c *tests/testthat/test-concat-seq.R
db77c2f3a0bba5f5449fca72f8c7e332 *tests/testthat/test-json2csv.R
