Last updated on 2025-12-21 23:49:08 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| circhelp | 4 | 6 | 3 |
Current CRAN status: ERROR: 4, NOTE: 6, OK: 3
Version: 1.1
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘functions.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 1.1
Check: examples
Result: ERROR
Running examples in ‘circhelp-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: remove_cardinal_biases
> ### Title: Remove cardinal biases
> ### Aliases: remove_cardinal_biases
>
> ### ** Examples
>
>
> # Data in orientation domain from Pascucci et al. (2019, PLOS Bio),
> # https://doi.org/10.5281/zenodo.2544946
>
> ex_data <- Pascucci_et_al_2019_data[observer == 4, ]
> remove_cardinal_biases(ex_data$err, ex_data$orientation, plots = "show")
Error in `[.data.table`(resid_at_boundaries, , `:=`(new_weight, ifelse(at_the_boundary == :
attempt access index 14/14 in VECTOR_ELT
Calls: remove_cardinal_biases -> [ -> [.data.table
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
circ_loess 4.236 0.072 6.278
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘cardinal_biases.Rmd’ using rmarkdown
Quitting from cardinal_biases.Rmd:65-68 [correct_biases_ex]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 14/14 in VECTOR_ELT
---
Backtrace:
▆
1. └─circhelp::remove_cardinal_biases(...)
2. ├─...[]
3. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'cardinal_biases.Rmd' failed with diagnostics:
attempt access index 14/14 in VECTOR_ELT
--- failed re-building ‘cardinal_biases.Rmd’
SUMMARY: processing the following file failed:
‘cardinal_biases.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.1
Check: examples
Result: ERROR
Running examples in ‘circhelp-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: remove_cardinal_biases
> ### Title: Remove cardinal biases
> ### Aliases: remove_cardinal_biases
>
> ### ** Examples
>
>
> # Data in orientation domain from Pascucci et al. (2019, PLOS Bio),
> # https://doi.org/10.5281/zenodo.2544946
>
> ex_data <- Pascucci_et_al_2019_data[observer == 4, ]
> remove_cardinal_biases(ex_data$err, ex_data$orientation, plots = "show")
Error in `[.data.table`(resid_at_boundaries, , `:=`(new_weight, ifelse(at_the_boundary == :
attempt access index 14/14 in VECTOR_ELT
Calls: remove_cardinal_biases -> [ -> [.data.table
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1
Check: examples
Result: ERROR
Running examples in ‘circhelp-Ex.R’ failed
The error most likely occurred in:
> ### Name: remove_cardinal_biases
> ### Title: Remove cardinal biases
> ### Aliases: remove_cardinal_biases
>
> ### ** Examples
>
>
> # Data in orientation domain from Pascucci et al. (2019, PLOS Bio),
> # https://doi.org/10.5281/zenodo.2544946
>
> ex_data <- Pascucci_et_al_2019_data[observer == 4, ]
> remove_cardinal_biases(ex_data$err, ex_data$orientation, plots = "show")
Error in `[.data.table`(resid_at_boundaries, , `:=`(new_weight, ifelse(at_the_boundary == :
attempt access index 14/14 in VECTOR_ELT
Calls: remove_cardinal_biases -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘cardinal_biases.Rmd’ using rmarkdown
Quitting from cardinal_biases.Rmd:65-68 [correct_biases_ex]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 14/14 in VECTOR_ELT
---
Backtrace:
▆
1. └─circhelp::remove_cardinal_biases(...)
2. ├─...[]
3. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'cardinal_biases.Rmd' failed with diagnostics:
attempt access index 14/14 in VECTOR_ELT
--- failed re-building ‘cardinal_biases.Rmd’
SUMMARY: processing the following file failed:
‘cardinal_biases.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc