CRAN Package Check Results for Maintainer ‘David Melamed <dmmelamed at gmail.com>’

Last updated on 2025-12-21 17:51:06 CET.

Package	ERROR	OK
catregs	5	8
rioplot		13

Package catregs

Current CRAN status: ERROR: 5, OK: 8

Version: 1.3
Check: examples
Result: ERROR Running examples in ‘catregs-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: compare.margins > ### Title: Compares two marginal effects (MEMs or AMEs). Estimate of > ### uncertainty is from a simulated draw from a normal distribution. > ### Aliases: compare.margins > > ### ** Examples > > data("essUK") > m1 <- glm(safe ~ religious + minority*female + age,data=essUK,family="binomial") > des<-margins.des(m1,expand.grid(minority=c(0,1),female=c(0,1))) > des minority female religious age 1 0 0 3.602404 53.14563 2 1 0 3.602404 53.14563 3 0 1 3.602404 53.14563 4 1 1 3.602404 53.14563 > ma1 <- suppressWarnings(as.data.frame(marginaleffects::avg_slopes(m1, + variables="female",newdata=marginaleffects::datagrid(minority=0, + religious=3.6024,age=53.146)))) Error in `[.data.table`(out, , `:=`(tmp_idx, seq_len(.N)), by = tmp) : attempt access index 13/13 in VECTOR_ELT Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘compare.margins.Rmd’ using rmarkdown Quitting from compare.margins.Rmd:15-29 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 13/13 in VECTOR_ELT --- Backtrace: ▆ 1. └─marginaleffects::comparisons(...) 2. ├─base::do.call("get_comparisons", args) 3. └─marginaleffects:::get_comparisons(...) 4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp] 5. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'compare.margins.Rmd' failed with diagnostics: attempt access index 13/13 in VECTOR_ELT --- failed re-building ‘compare.margins.Rmd’ --- re-building ‘count.fit.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘count.fit.Rmd’ --- re-building ‘daign.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘daign.Rmd’ --- re-building ‘first.diff.fitted.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘first.diff.fitted.Rmd’ --- re-building ‘list.coef.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘list.coef.Rmd’ --- re-building ‘margins.dat.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘margins.dat.Rmd’ --- re-building ‘margins.dat.clogit.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘margins.dat.clogit.Rmd’ --- re-building ‘margins.des.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘margins.des.Rmd’ --- re-building ‘rubins.rule.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘rubins.rule.Rmd’ --- re-building ‘second.diff.fitted.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘second.diff.fitted.Rmd’ SUMMARY: processing the following file failed: ‘compare.margins.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.3
Check: examples
Result: ERROR Running examples in ‘catregs-Ex.R’ failed The error most likely occurred in: > ### Name: compare.margins > ### Title: Compares two marginal effects (MEMs or AMEs). Estimate of > ### uncertainty is from a simulated draw from a normal distribution. > ### Aliases: compare.margins > > ### ** Examples > > data("essUK") > m1 <- glm(safe ~ religious + minority*female + age,data=essUK,family="binomial") > des<-margins.des(m1,expand.grid(minority=c(0,1),female=c(0,1))) > des minority female religious age 1 0 0 3.602404 53.14563 2 1 0 3.602404 53.14563 3 0 1 3.602404 53.14563 4 1 1 3.602404 53.14563 > ma1 <- suppressWarnings(as.data.frame(marginaleffects::avg_slopes(m1, + variables="female",newdata=marginaleffects::datagrid(minority=0, + religious=3.6024,age=53.146)))) Error in `[.data.table`(out, , `:=`(tmp_idx, seq_len(.N)), by = tmp) : attempt access index 13/13 in VECTOR_ELT Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 1.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘compare.margins.Rmd’ using rmarkdown Quitting from compare.margins.Rmd:15-29 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 13/13 in VECTOR_ELT --- Backtrace: ▆ 1. └─marginaleffects::comparisons(...) 2. ├─base::do.call("get_comparisons", args) 3. └─marginaleffects:::get_comparisons(...) 4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp] 5. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'compare.margins.Rmd' failed with diagnostics: attempt access index 13/13 in VECTOR_ELT --- failed re-building ‘compare.margins.Rmd’ --- re-building ‘count.fit.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘count.fit.Rmd’ --- re-building ‘daign.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘daign.Rmd’ --- re-building ‘first.diff.fitted.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘first.diff.fitted.Rmd’ --- re-building ‘list.coef.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘list.coef.Rmd’ --- re-building ‘margins.dat.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘margins.dat.Rmd’ --- re-building ‘margins.dat.clogit.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘margins.dat.clogit.Rmd’ --- re-building ‘margins.des.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘margins.des.Rmd’ --- re-building ‘rubins.rule.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘rubins.rule.Rmd’ --- re-building ‘second.diff.fitted.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘second.diff.fitted.Rmd’ SUMMARY: processing the following file failed: ‘compare.margins.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'compare.margins.Rmd' using rmarkdown Quitting from compare.margins.Rmd:15-29 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 13/13 in VECTOR_ELT --- Backtrace: ▆ 1. └─marginaleffects::comparisons(...) 2. ├─base::do.call("get_comparisons", args) 3. └─marginaleffects:::get_comparisons(...) 4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp] 5. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'compare.margins.Rmd' failed with diagnostics: attempt access index 13/13 in VECTOR_ELT --- failed re-building 'compare.margins.Rmd' --- re-building 'count.fit.Rmd' using rmarkdown --- finished re-building 'count.fit.Rmd' --- re-building 'daign.Rmd' using rmarkdown --- finished re-building 'daign.Rmd' --- re-building 'first.diff.fitted.Rmd' using rmarkdown --- finished re-building 'first.diff.fitted.Rmd' --- re-building 'list.coef.Rmd' using rmarkdown --- finished re-building 'list.coef.Rmd' --- re-building 'margins.dat.Rmd' using rmarkdown --- finished re-building 'margins.dat.Rmd' --- re-building 'margins.dat.clogit.Rmd' using rmarkdown --- finished re-building 'margins.dat.clogit.Rmd' --- re-building 'margins.des.Rmd' using rmarkdown --- finished re-building 'margins.des.Rmd' --- re-building 'rubins.rule.Rmd' using rmarkdown --- finished re-building 'rubins.rule.Rmd' --- re-building 'second.diff.fitted.Rmd' using rmarkdown --- finished re-building 'second.diff.fitted.Rmd' SUMMARY: processing the following file failed: 'compare.margins.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64

Package rioplot

Current CRAN status: OK: 13