Last updated on 2025-12-21 11:50:33 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| EvaluateCore | 10 | ||
| germinationmetrics | 4 | 9 | |
| PGRdup | 1 | 12 |
Current CRAN status: OK: 10
Current CRAN status: ERROR: 4, OK: 9
Version: 0.1.9
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Introduction.Rmd’ using rmarkdown_notangle
Quitting from Introduction.Rmd:435-436 [runCode-germination.indices]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 17/17 in VECTOR_ELT
---
Backtrace:
x
1. \-germinationmetrics::germination.indices(...)
2. +-...[]
3. \-data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
attempt access index 17/17 in VECTOR_ELT
--- failed re-building ‘Introduction.Rmd’
SUMMARY: processing the following file failed:
‘Introduction.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.9
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘Introduction.Rmd’ using rmarkdown_notangle
Quitting from Introduction.Rmd:435-436 [runCode-germination.indices]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 17/17 in VECTOR_ELT
---
Backtrace:
x
1. \-germinationmetrics::germination.indices(...)
2. +-...[]
3. \-data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
attempt access index 17/17 in VECTOR_ELT
--- failed re-building ‘Introduction.Rmd’
SUMMARY: processing the following file failed:
‘Introduction.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 1, OK: 12
Version: 0.2.3.9
Check: Rd files
Result: NOTE
checkRd: (-1) GN1000.Rd:8: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:8: Lost braces
8 | columns(fields): \itemize{ \item{CommonName}{ : }{Common name}
| ^
checkRd: (-1) GN1000.Rd:9: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:9: Lost braces
9 | \item{BotanicalName}{ : }{Botanical name} \item{NationalID}{ : }{NBPGR
| ^
checkRd: (-1) GN1000.Rd:9-10: Lost braces
9 | \item{BotanicalName}{ : }{Botanical name} \item{NationalID}{ : }{NBPGR
| ^
checkRd: (-1) GN1000.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:10: Lost braces
10 | National identifier} \item{CollNo}{ : }{Collector number} \item{DonorID}{ :
| ^
checkRd: (-1) GN1000.Rd:10-11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:11: Lost braces
11 | }{Donor ID} \item{OtherID1}{ : }{Other ID field 1} \item{OtherID2}{ :
| ^
checkRd: (-1) GN1000.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:11: Lost braces
11 | }{Donor ID} \item{OtherID1}{ : }{Other ID field 1} \item{OtherID2}{ :
| ^
checkRd: (-1) GN1000.Rd:11-12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:12: Lost braces
12 | }{Other ID field 2} \item{BioStatus}{ : }{Biological status}
| ^
checkRd: (-1) GN1000.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:12: Lost braces
12 | }{Other ID field 2} \item{BioStatus}{ : }{Biological status}
| ^
checkRd: (-1) GN1000.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GN1000.Rd:13: Lost braces
13 | \item{SourceCountry}{ : }{Country of origin} \item{TransferYear}{ : }{Year
| ^
checkRd: (-1) GN1000.Rd:13-14: Lost braces
13 | \item{SourceCountry}{ : }{Country of origin} \item{TransferYear}{ : }{Year
| ^
checkRd: (-1) ReviewProbDup.Rd:35: Lost braces
35 | \item{insert.blanks}{logical. If \code{TRUE}, inserts a row of /code{NAs}
| ^
Flavor: r-release-linux-x86_64