Last updated on 2025-12-21 11:50:35 CET.
| Package | ERROR | WARN | OK |
|---|---|---|---|
| brmsmargins | 4 | 9 | |
| extraoperators | 13 | ||
| JWileymisc | 7 | 6 | |
| multilevelTools | 4 | 9 | |
| pscore | 13 |
Current CRAN status: WARN: 4, OK: 9
Version: 0.2.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.5/brmsmargins.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
Flavor: r-release-macos-arm64
Version: 0.2.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
See ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.5/brmsmargins.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
* used SDK: ‘MacOSX11.3.sdk’
Flavor: r-release-macos-x86_64
Version: 0.2.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.4/brmsmargins.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
Flavor: r-oldrel-macos-arm64
Version: 0.2.1
Check: installed package size
Result: NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
doc 2.8Mb
libs 2.7Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.2.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
See ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.4/brmsmargins.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
* used SDK: ‘MacOSX11.3.sdk’
Flavor: r-oldrel-macos-x86_64
Current CRAN status: OK: 13
Current CRAN status: ERROR: 7, OK: 6
Version: 1.4.4
Check: examples
Result: ERROR
Running examples in ‘JWileymisc-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: APAStyler.modelTest.vglm
> ### Title: APAStyler method for model tests from a vglm multinomial model
> ### Aliases: APAStyler.modelTest.vglm
>
> ### ** Examples
>
> mtcars$cyl <- factor(mtcars$cyl)
> m <- VGAM::vglm(cyl ~ qsec,
+ family = VGAM::multinomial(), data = mtcars)
> mt <- modelTest(m)
>
> APAStyler(mt)
Error in `[.data.table`(FE, , `:=`(Count, .N), by = Term) :
attempt access index 6/6 in VECTOR_ELT
Calls: APAStyler -> APAStyler.modelTest.vglm -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.4.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [34s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("JWileymisc")
Loading required package: JWileymisc
Saving _problems/test-APAStyler-36.R
$`1`
$`2`
attr(,"class")
[1] "list" "ggarrange"
Saving _problems/test-modelTest-104.R
Saving _problems/test-modelTest-116.R
Loading required namespace: GPArotation
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-distributions.R:75:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-APAStyler.R:36:3'): APAStyler works with vglm model tests ──────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─JWileymisc::APAStyler(mt, print = FALSE) at test-APAStyler.R:36:3
2. └─JWileymisc:::APAStyler.modelTest.vglm(mt, print = FALSE)
3. ├─FE[, `:=`(Count, .N), by = Term]
4. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:104:3'): modelTest works with vglm objects. ────────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:104:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:116:3'): modelTest works with vglm objects with multiple predictors. ──
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:116:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.4.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [21s/24s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("JWileymisc")
Loading required package: JWileymisc
Saving _problems/test-APAStyler-36.R
$`1`
$`2`
attr(,"class")
[1] "list" "ggarrange"
Saving _problems/test-modelTest-104.R
Saving _problems/test-modelTest-116.R
Loading required namespace: GPArotation
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-distributions.R:75:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-APAStyler.R:36:3'): APAStyler works with vglm model tests ──────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─JWileymisc::APAStyler(mt, print = FALSE) at test-APAStyler.R:36:3
2. └─JWileymisc:::APAStyler.modelTest.vglm(mt, print = FALSE)
3. ├─FE[, `:=`(Count, .N), by = Term]
4. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:104:3'): modelTest works with vglm objects. ────────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:104:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:116:3'): modelTest works with vglm objects with multiple predictors. ──
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:116:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.4.4
Check: examples
Result: ERROR
Running examples in ‘JWileymisc-Ex.R’ failed
The error most likely occurred in:
> ### Name: APAStyler.modelTest.vglm
> ### Title: APAStyler method for model tests from a vglm multinomial model
> ### Aliases: APAStyler.modelTest.vglm
>
> ### ** Examples
>
> mtcars$cyl <- factor(mtcars$cyl)
> m <- VGAM::vglm(cyl ~ qsec,
+ family = VGAM::multinomial(), data = mtcars)
> mt <- modelTest(m)
>
> APAStyler(mt)
Error in `[.data.table`(FE, , `:=`(Count, .N), by = Term) :
attempt access index 6/6 in VECTOR_ELT
Calls: APAStyler -> APAStyler.modelTest.vglm -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.4.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [51s/59s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("JWileymisc")
Loading required package: JWileymisc
Saving _problems/test-APAStyler-36.R
$`1`
$`2`
attr(,"class")
[1] "list" "ggarrange"
Saving _problems/test-modelTest-104.R
Saving _problems/test-modelTest-116.R
Loading required namespace: GPArotation
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-distributions.R:75:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-APAStyler.R:36:3'): APAStyler works with vglm model tests ──────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─JWileymisc::APAStyler(mt, print = FALSE) at test-APAStyler.R:36:3
2. └─JWileymisc:::APAStyler.modelTest.vglm(mt, print = FALSE)
3. ├─FE[, `:=`(Count, .N), by = Term]
4. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:104:3'): modelTest works with vglm objects. ────────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:104:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:116:3'): modelTest works with vglm objects with multiple predictors. ──
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:116:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.4.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [49s/68s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("JWileymisc")
Loading required package: JWileymisc
Saving _problems/test-APAStyler-36.R
$`1`
$`2`
attr(,"class")
[1] "list" "ggarrange"
Saving _problems/test-modelTest-104.R
Saving _problems/test-modelTest-116.R
Loading required namespace: GPArotation
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-distributions.R:75:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-APAStyler.R:36:3'): APAStyler works with vglm model tests ──────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─JWileymisc::APAStyler(mt, print = FALSE) at test-APAStyler.R:36:3
2. └─JWileymisc:::APAStyler.modelTest.vglm(mt, print = FALSE)
3. ├─FE[, `:=`(Count, .N), by = Term]
4. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:104:3'): modelTest works with vglm objects. ────────
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:104:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
── Error ('test-modelTest.R:116:3'): modelTest works with vglm objects with multiple predictors. ──
Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:116:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─JWileymisc::APAStyler(mt)
5. └─JWileymisc:::APAStyler.modelTest.vglm(mt)
6. ├─FE[, `:=`(Count, .N), by = Term]
7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term)
[ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.4.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [32s/42s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("JWileymisc")
Loading required package: JWileymisc
$`1`
$`2`
attr(,"class")
[1] "list" "ggarrange"
Saving _problems/test-descriptives-helpers-24.R
Loading required namespace: GPArotation
[ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-distributions.R:75:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-descriptives-helpers.R:22:5'): .stylepairedwilcox works ──────
Expected `res` to equal "Wilcoxon Paired V = 54.00, p = .004".
Differences:
`actual`: "Wilcoxon Paired V = 45.00, p = .009"
`expected`: "Wilcoxon Paired V = 54.00, p = .004"
[ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ]
Error:
! Test failures.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.4.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [32s/37s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("JWileymisc")
Loading required package: JWileymisc
$`1`
$`2`
attr(,"class")
[1] "list" "ggarrange"
Saving _problems/test-descriptives-helpers-24.R
Loading required namespace: GPArotation
[ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-distributions.R:75:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-descriptives-helpers.R:22:5'): .stylepairedwilcox works ──────
Expected `res` to equal "Wilcoxon Paired V = 54.00, p = .004".
Differences:
`actual`: "Wilcoxon Paired V = 45.00, p = .009"
`expected`: "Wilcoxon Paired V = 54.00, p = .004"
[ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.4.4
Check: tests
Result: ERROR
Running 'testthat.R' [27s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> test_check("JWileymisc")
Loading required package: JWileymisc
$`1`
$`2`
attr(,"class")
[1] "list" "ggarrange"
Saving _problems/test-descriptives-helpers-24.R
Loading required namespace: GPArotation
[ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-distributions.R:75:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-descriptives-helpers.R:22:5'): .stylepairedwilcox works ──────
Expected `res` to equal "Wilcoxon Paired V = 54.00, p = .004".
Differences:
`actual`: "Wilcoxon Paired V = 45.00, p = .009"
`expected`: "Wilcoxon Paired V = 54.00, p = .004"
[ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-windows-x86_64
Current CRAN status: ERROR: 4, OK: 9
Version: 0.2.1
Check: examples
Result: ERROR
Running examples in ‘multilevelTools-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: evaluateLags
> ### Title: Create lag variables and evaluate models with different number
> ### of lags
> ### Aliases: evaluateLags
>
> ### ** Examples
>
> ## these examples are slow to run
> data(aces_daily, package = "JWileymisc")
>
> evaluateLags(
+ "NegAff ~ Female + Age + BornAUS + (1 | UserID)",
+ "STRESS",
+ 4L,
+ "UserID",
+ aces_daily)
Error in `[.data.table`(data, , `:=`((lags), lapply(1:nlags, function(i) lagk(get(lagvar), :
attempt access index 19/19 in VECTOR_ELT
Calls: evaluateLags -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/12s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(multilevelTools)
> library(JWileymisc)
>
> test_check("multilevelTools")
Saving _problems/test-descriptives-2.R
Saving _problems/test-descriptives-19.R
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
══ Skipped tests (19) ══════════════════════════════════════════════════════════
• On CRAN (19): 'test-diagnostics.R:2:3', 'test-diagnostics.R:14:3',
'test-diagnostics.R:31:3', 'test-diagnostics.R:50:3',
'test-diagnostics.R:73:3', 'test-diagnostics.R:85:3',
'test-diagnostics.R:100:3', 'test-diagnostics.R:115:3',
'test-diagnostics.R:130:3', 'test-models.R:2:3', 'test-models.R:36:3',
'test-models.R:48:3', 'test-models.R:72:3', 'test-models.R:98:3',
'test-models.R:133:3', 'test-models.R:186:3', 'test-plotting.R:2:3',
'test-plotting.R:22:3', 'test-styler.R:2:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-descriptives.R:2:3'): meanDecompose works with one grouping factor ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 3/3 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ cyl, data = mtcars) at test-descriptives.R:2:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
── Error ('test-descriptives.R:19:3'): meanDecompose works with two grouping factors ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ vs + cyl, data = mtcars) at test-descriptives.R:19:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘lmer-vignette.Rmd’ using rmarkdown
Quitting from lmer-vignette.Rmd:178-191 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 3/3 in VECTOR_ELT
---
Backtrace:
▆
1. └─multilevelTools::meanDecompose(NegAff ~ UserID, data = aces_daily)
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'lmer-vignette.Rmd' failed with diagnostics:
attempt access index 3/3 in VECTOR_ELT
--- failed re-building ‘lmer-vignette.Rmd’
SUMMARY: processing the following file failed:
‘lmer-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [6s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(multilevelTools)
> library(JWileymisc)
>
> test_check("multilevelTools")
Saving _problems/test-descriptives-2.R
Saving _problems/test-descriptives-19.R
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
══ Skipped tests (19) ══════════════════════════════════════════════════════════
• On CRAN (19): 'test-diagnostics.R:2:3', 'test-diagnostics.R:14:3',
'test-diagnostics.R:31:3', 'test-diagnostics.R:50:3',
'test-diagnostics.R:73:3', 'test-diagnostics.R:85:3',
'test-diagnostics.R:100:3', 'test-diagnostics.R:115:3',
'test-diagnostics.R:130:3', 'test-models.R:2:3', 'test-models.R:36:3',
'test-models.R:48:3', 'test-models.R:72:3', 'test-models.R:98:3',
'test-models.R:133:3', 'test-models.R:186:3', 'test-plotting.R:2:3',
'test-plotting.R:22:3', 'test-styler.R:2:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-descriptives.R:2:3'): meanDecompose works with one grouping factor ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 3/3 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ cyl, data = mtcars) at test-descriptives.R:2:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
── Error ('test-descriptives.R:19:3'): meanDecompose works with two grouping factors ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ vs + cyl, data = mtcars) at test-descriptives.R:19:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: examples
Result: ERROR
Running examples in ‘multilevelTools-Ex.R’ failed
The error most likely occurred in:
> ### Name: evaluateLags
> ### Title: Create lag variables and evaluate models with different number
> ### of lags
> ### Aliases: evaluateLags
>
> ### ** Examples
>
> ## these examples are slow to run
> data(aces_daily, package = "JWileymisc")
>
> evaluateLags(
+ "NegAff ~ Female + Age + BornAUS + (1 | UserID)",
+ "STRESS",
+ 4L,
+ "UserID",
+ aces_daily)
Error in `[.data.table`(data, , `:=`((lags), lapply(1:nlags, function(i) lagk(get(lagvar), :
attempt access index 19/19 in VECTOR_ELT
Calls: evaluateLags -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/28s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(multilevelTools)
> library(JWileymisc)
>
> test_check("multilevelTools")
Saving _problems/test-descriptives-2.R
Saving _problems/test-descriptives-19.R
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
══ Skipped tests (19) ══════════════════════════════════════════════════════════
• On CRAN (19): 'test-diagnostics.R:2:3', 'test-diagnostics.R:14:3',
'test-diagnostics.R:31:3', 'test-diagnostics.R:50:3',
'test-diagnostics.R:73:3', 'test-diagnostics.R:85:3',
'test-diagnostics.R:100:3', 'test-diagnostics.R:115:3',
'test-diagnostics.R:130:3', 'test-models.R:2:3', 'test-models.R:36:3',
'test-models.R:48:3', 'test-models.R:72:3', 'test-models.R:98:3',
'test-models.R:133:3', 'test-models.R:186:3', 'test-plotting.R:2:3',
'test-plotting.R:22:3', 'test-styler.R:2:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-descriptives.R:2:3'): meanDecompose works with one grouping factor ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 3/3 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ cyl, data = mtcars) at test-descriptives.R:2:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
── Error ('test-descriptives.R:19:3'): meanDecompose works with two grouping factors ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ vs + cyl, data = mtcars) at test-descriptives.R:19:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘lmer-vignette.Rmd’ using rmarkdown
Quitting from lmer-vignette.Rmd:178-191 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 3/3 in VECTOR_ELT
---
Backtrace:
▆
1. └─multilevelTools::meanDecompose(NegAff ~ UserID, data = aces_daily)
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'lmer-vignette.Rmd' failed with diagnostics:
attempt access index 3/3 in VECTOR_ELT
--- failed re-building ‘lmer-vignette.Rmd’
SUMMARY: processing the following file failed:
‘lmer-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/27s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(multilevelTools)
> library(JWileymisc)
>
> test_check("multilevelTools")
Saving _problems/test-descriptives-2.R
Saving _problems/test-descriptives-19.R
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
══ Skipped tests (19) ══════════════════════════════════════════════════════════
• On CRAN (19): 'test-diagnostics.R:2:3', 'test-diagnostics.R:14:3',
'test-diagnostics.R:31:3', 'test-diagnostics.R:50:3',
'test-diagnostics.R:73:3', 'test-diagnostics.R:85:3',
'test-diagnostics.R:100:3', 'test-diagnostics.R:115:3',
'test-diagnostics.R:130:3', 'test-models.R:2:3', 'test-models.R:36:3',
'test-models.R:48:3', 'test-models.R:72:3', 'test-models.R:98:3',
'test-models.R:133:3', 'test-models.R:186:3', 'test-plotting.R:2:3',
'test-plotting.R:22:3', 'test-styler.R:2:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-descriptives.R:2:3'): meanDecompose works with one grouping factor ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 3/3 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ cyl, data = mtcars) at test-descriptives.R:2:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
── Error ('test-descriptives.R:19:3'): meanDecompose works with two grouping factors ──
Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─multilevelTools::meanDecompose(mpg ~ vs + cyl, data = mtcars) at test-descriptives.R:19:3
2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]
3. └─data.table:::`[.data.table`(...)
[ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 13