Last updated on 2026-06-18 23:56:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0 | 93.34 | 189.66 | 283.00 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0 | 67.90 | 122.41 | 190.31 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0 | 152.00 | 279.53 | 431.53 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.0 | 169.00 | 273.80 | 442.80 | OK | |
| r-devel-windows-x86_64 | 1.0 | 124.00 | 216.00 | 340.00 | OK | |
| r-patched-linux-x86_64 | 1.0 | 90.66 | 177.04 | 267.70 | OK | |
| r-release-linux-x86_64 | 1.0 | 90.30 | 178.28 | 268.58 | OK | |
| r-release-macos-arm64 | 1.0 | 21.00 | 55.00 | 76.00 | OK | |
| r-release-macos-x86_64 | 1.0 | 60.00 | 160.00 | 220.00 | OK | |
| r-release-windows-x86_64 | 1.0 | 110.00 | 211.00 | 321.00 | OK | |
| r-oldrel-macos-arm64 | 1.0 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0 | 54.00 | 172.00 | 226.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0 | 137.00 | 265.00 | 402.00 | OK |
Version: 1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [6s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(kmeRtone)
>
> testthat::test_check("kmeRtone")
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
------------------------------------------------------------
Extraction of Case K-mers
------------------------------------------------------------
Extracting 2-mers from chr20............Saving _problems/test_score-40.R
[ FAIL 1 | WARN 2 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_score.R:25:1'): (code run outside of `test_that()`) ────────────
Error in `download.file(file, tmpFile, method = method, mode = "wb", quiet = !showProgress)`: cannot open URL 'https://hgdownload.soe.ucsc.edu/goldenPath/hg19/chromosomes/'
Backtrace:
▆
1. └─kmeRtone::kmeRtone(...) at test_score.R:25:1
2. └─kmeRtone::SCORE(...)
3. └─kmeRtone::extractKmers(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
[ FAIL 1 | WARN 2 | SKIP 0 | PASS 0 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc