Last updated on 2026-03-02 23:51:51 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.78 | 251.23 | 265.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.67 | 201.77 | 213.44 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 298.64 | 320.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 340.25 | 371.25 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 196.00 | 218.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 278.82 | 294.00 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.86 | 254.60 | 270.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 159.00 | 170.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 487.00 | 497.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 246.00 | 272.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [105s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.050, elapsed: 2.227 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.424, system: 0.058, elapsed: 12.897 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.018, elapsed: 1.154 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.955, system: 0.707, elapsed: 16.917 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.003, elapsed: 0.169 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.976, system: 0.865, elapsed: 34.156 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.682, system: 0.050, elapsed: 1.577 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.236, system: 0.050, elapsed: 10.047 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.013, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.199, system: 0.717, elapsed: 9.694 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.223, system: 0.870, elapsed: 22.323 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.618, system: 0.048, elapsed: 1.484 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.098, system: 0.092, elapsed: 9.637 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.428, system: 0.032, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.629, system: 0.938, elapsed: 7.225 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.162 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.253, system: 0.310, elapsed: 1.057 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.211, system: 1.487, elapsed: 20.577 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.040, elapsed: 1.593 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.398, system: 0.074, elapsed: 10.755 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.017, elapsed: 0.244 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.374, system: 0.890, elapsed: 6.726 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.173 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 13.289, system: 0.880, elapsed: 13.574 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.639, system: 1.947, elapsed: 33.845 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [100s/408s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.617, system: 0.041, elapsed: 4.276 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.562, system: 0.064, elapsed: 22.445 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.019, elapsed: 1.188 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.486, system: 0.837, elapsed: 79.715 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.169 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.626, system: 0.988, elapsed: 109.019 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.534, system: 0.029, elapsed: 2.387 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.505, system: 0.061, elapsed: 12.379 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.015, elapsed: 0.905 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.602, system: 0.794, elapsed: 82.387 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.002, elapsed: 0.159 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.556, system: 0.922, elapsed: 99.040 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.028, elapsed: 2.219 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.434, system: 0.060, elapsed: 13.141 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.015, elapsed: 1.031 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.758, system: 0.709, elapsed: 38.992 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.006, elapsed: 0.182 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.243, system: 0.313, elapsed: 0.980 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.023, system: 1.155, elapsed: 57.524 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.035, elapsed: 1.871 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.426, system: 0.070, elapsed: 10.376 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.014, elapsed: 0.241 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.743, system: 0.811, elapsed: 91.347 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.251 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.957, system: 0.776, elapsed: 26.138 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.748, system: 1.744, elapsed: 131.141 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64