CRAN Package Check Results for Maintainer ‘Michael Hellstern <mikeh1 at uw.edu>’

Last updated on 2025-12-21 17:51:17 CET.

Package ERROR NOTE OK
micvar 13
netgsa 5 2 6

Package micvar

Current CRAN status: OK: 13

Package netgsa

Current CRAN status: ERROR: 5, NOTE: 2, OK: 6

Version: 4.0.6
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘netgsa.Rmd’ using rmarkdown Quitting from netgsa.Rmd:149-154 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 5/5 in VECTOR_ELT --- Backtrace: ▆ 1. └─netgsa::prepareAdjMat(...) 2. ├─...[] 3. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'netgsa.Rmd' failed with diagnostics: attempt access index 5/5 in VECTOR_ELT --- failed re-building ‘netgsa.Rmd’ SUMMARY: processing the following file failed: ‘netgsa.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 4.0.6
Check: CRAN incoming feasibility
Result: WARN Maintainer: ‘Michael Hellstern <mikeh1@uw.edu>’ Strong dependencies not in the CRAN or BioC software repositories: org.Hs.eg.db Flavor: r-devel-linux-x86_64-debian-gcc

Version: 4.0.6
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘netgsa.Rmd’ using rmarkdown Quitting from netgsa.Rmd:149-154 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 5/5 in VECTOR_ELT --- Backtrace: ▆ 1. └─netgsa::prepareAdjMat(...) 2. ├─...[] 3. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'netgsa.Rmd' failed with diagnostics: attempt access index 5/5 in VECTOR_ELT --- failed re-building ‘netgsa.Rmd’ SUMMARY: processing the following file failed: ‘netgsa.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 4.0.6
Check: package dependencies
Result: ERROR Packages required but not available: 'graphite', 'RCy3' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-arm64

Version: 4.0.6
Check: installed package size
Result: NOTE installed size is 21.2Mb sub-directories of 1Mb or more: doc 2.8Mb libs 17.5Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64