Last updated on 2025-12-21 11:50:40 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| latrend | 4 | 2 | 7 |
Current CRAN status: ERROR: 4, NOTE: 2, OK: 7
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘demo.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: longitudinal k-means (KML)
---------------------------------------------------------------------------
Method arguments:
time: getOption("latrend.time")
id: getOption("latrend.id")
nClusters: 2
nbRedrawing: 1
maxIt: 200
imputationMethod:"copyMean"
distanceName: "euclidean"
power: 2
distance: function() {}
centerMethod: meanNA
startingCond: "nearlyAll"
nbCriterion: 1000
scale: TRUE
response: "Y"
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.35 secs)
---------------------------------------------------------------------------
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘demo.Rmd’
--- re-building ‘implement.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: meanNA
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: Y[1] > 1.6
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.019 secs)
---------------------------------------------------------------------------
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: mean
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: stratfun
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.23 secs)
---------------------------------------------------------------------------
Quitting from implement.Rmd:115-124 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 8/8 in VECTOR_ELT
---
Backtrace:
▆
1. ├─casedata[, `:=`(Intercept, coef(lm(Y ~ Time, .SD))[1]), by = Traj]
2. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'implement.Rmd' failed with diagnostics:
attempt access index 8/8 in VECTOR_ELT
--- failed re-building ‘implement.Rmd’
--- re-building ‘simulation.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘simulation.Rmd’
SUMMARY: processing the following file failed:
‘implement.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘demo.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: longitudinal k-means (KML)
---------------------------------------------------------------------------
Method arguments:
time: getOption("latrend.time")
id: getOption("latrend.id")
nClusters: 2
nbRedrawing: 1
maxIt: 200
imputationMethod:"copyMean"
distanceName: "euclidean"
power: 2
distance: function() {}
centerMethod: meanNA
startingCond: "nearlyAll"
nbCriterion: 1000
scale: TRUE
response: "Y"
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.19 secs)
---------------------------------------------------------------------------
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘demo.Rmd’
--- re-building ‘implement.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: meanNA
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: Y[1] > 1.6
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.014 secs)
---------------------------------------------------------------------------
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: mean
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: stratfun
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.092 secs)
---------------------------------------------------------------------------
Quitting from implement.Rmd:115-124 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 8/8 in VECTOR_ELT
---
Backtrace:
▆
1. ├─casedata[, `:=`(Intercept, coef(lm(Y ~ Time, .SD))[1]), by = Traj]
2. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'implement.Rmd' failed with diagnostics:
attempt access index 8/8 in VECTOR_ELT
--- failed re-building ‘implement.Rmd’
--- re-building ‘simulation.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘simulation.Rmd’
SUMMARY: processing the following file failed:
‘implement.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘demo.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: longitudinal k-means (KML)
---------------------------------------------------------------------------
Method arguments:
time: getOption("latrend.time")
id: getOption("latrend.id")
nClusters: 2
nbRedrawing: 1
maxIt: 200
imputationMethod:"copyMean"
distanceName: "euclidean"
power: 2
distance: function() {}
centerMethod: meanNA
startingCond: "nearlyAll"
nbCriterion: 1000
scale: TRUE
response: "Y"
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.56 secs)
---------------------------------------------------------------------------
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘demo.Rmd’
--- re-building ‘implement.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: meanNA
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: Y[1] > 1.6
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.085 secs)
---------------------------------------------------------------------------
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: mean
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: stratfun
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.48 secs)
---------------------------------------------------------------------------
Quitting from implement.Rmd:115-124 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 8/8 in VECTOR_ELT
---
Backtrace:
▆
1. ├─casedata[, `:=`(Intercept, coef(lm(Y ~ Time, .SD))[1]), by = Traj]
2. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'implement.Rmd' failed with diagnostics:
attempt access index 8/8 in VECTOR_ELT
--- failed re-building ‘implement.Rmd’
--- re-building ‘simulation.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘simulation.Rmd’
SUMMARY: processing the following file failed:
‘implement.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘demo.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: longitudinal k-means (KML)
---------------------------------------------------------------------------
Method arguments:
time: getOption("latrend.time")
id: getOption("latrend.id")
nClusters: 2
nbRedrawing: 1
maxIt: 200
imputationMethod:"copyMean"
distanceName: "euclidean"
power: 2
distance: function() {}
centerMethod: meanNA
startingCond: "nearlyAll"
nbCriterion: 1000
scale: TRUE
response: "Y"
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.83 secs)
---------------------------------------------------------------------------
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘demo.Rmd’
--- re-building ‘implement.Rmd’ using rmarkdown
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: meanNA
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: Y[1] > 1.6
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.055 secs)
---------------------------------------------------------------------------
---------------------------------------------------------------------------
- Longitudinal clustering using: stratify
---------------------------------------------------------------------------
Method arguments:
center: mean
nClusters: NaN
clusterNames: NULL
time: getOption("latrend.time")
id: getOption("latrend.id")
name: "stratify"
response: "Y"
stratify: stratfun
---------------------------------------------------------------------------
Checking and transforming the training data format.
Preparing the training data for fitting...
Fitting the method...
Done fitting the method (0.29 secs)
---------------------------------------------------------------------------
Quitting from implement.Rmd:115-124 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 8/8 in VECTOR_ELT
---
Backtrace:
▆
1. ├─casedata[, `:=`(Intercept, coef(lm(Y ~ Time, .SD))[1]), by = Traj]
2. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'implement.Rmd' failed with diagnostics:
attempt access index 8/8 in VECTOR_ELT
--- failed re-building ‘implement.Rmd’
--- re-building ‘simulation.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘simulation.Rmd’
SUMMARY: processing the following file failed:
‘implement.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.6.2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘mixAK’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.6.2
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: ‘mixAK’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64