Last updated on 2026-11-11 11:51:39 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 197.87 | 693.69 | 891.56 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 172.28 | 466.13 | 638.41 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 165.00 | 453.39 | 618.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 186.00 | 443.94 | 629.94 | OK | |
| r-devel-windows-x86_64 | 1.0.0 | 321.00 | 946.00 | 1267.00 | OK | |
| r-patched-linux-x86_64 | 0.4.4 | OK | ||||
| r-release-linux-x86_64 | 0.4.4 | 127.40 | 451.57 | 578.97 | OK | |
| r-release-macos-arm64 | 1.0.0 | 46.00 | 145.00 | 191.00 | OK | |
| r-release-macos-x86_64 | 1.0.0 | 133.00 | 416.00 | 549.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 334.00 | 764.00 | 1098.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0.0 | 127.00 | 1048.00 | 1175.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.0 | 301.00 | 679.00 | 980.00 | OK |
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘a01_overview.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘a01_overview.Rmd’
--- re-building ‘a02_qc.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘a02_qc.Rmd’
--- re-building ‘a03_example_clustering_and_dapc.Rmd’ using rmarkdown
Quitting from a03_example_clustering_and_dapc.Rmd:85-102 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'rnaturalearth'
---
Backtrace:
▆
1. └─base::library(rnaturalearth)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'a03_example_clustering_and_dapc.Rmd' failed with diagnostics:
there is no package called 'rnaturalearth'
--- failed re-building ‘a03_example_clustering_and_dapc.Rmd’
--- re-building ‘a99_plink_cheatsheet.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘a99_plink_cheatsheet.Rmd’
--- re-building ‘tidypopgen.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘tidypopgen.Rmd’
SUMMARY: processing the following file failed:
‘a03_example_clustering_and_dapc.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc